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Figures 5C,D show 50kbp exploded views of the two statistically significant eQTL, (MGST1 red, and DERA yellow), with variants coloured according to their linkage disequilibrium with the top milk fat percentage associated SNP g.93945738C>T. Figure 5E shows the rank order of associated variants between the milk fat percentage QTL and MGST1 eQTL, plotting log10 P values for each phenotype on the x and y axes respectively. Both QTLs share the same lead variant (g.93945738C>T), part of the cluster of 17 top ranked variants identified in analysis of milk fat percentage (demarcated by the blue box in Figure 5B,E)..
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